Function reference
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ConstructMCMCArray() - Read in JAGS objects
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NJ_core_species - Core species counts from New Jersey, USA.
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NJ_modern_elevation - Modern elevations from New Jersey, USA.
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NJ_modern_species - Modern species counts from New Jersey, USA.
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NJ_priors - Prior elevation ranges for core assemblages
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eff_size() - Run MCMC diagnostics - effective sample size
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gr_diag() - Run MCMC diagnostics - rhat
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mcse() - Run MCMC diagnostics - monte carlo standard error (mcse)
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response_curves() - Create Species Response Curves
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run_core() - Run the core model
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run_modern() - Run the modern (calibration) model
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run_valid() - Carry out a validation
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sort_core() - Sort core dataset to be compatible with the sorted modern data
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sort_modern() - Sort modern species dataset based on total count size
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swli_results() - Get SWLI estimates and uncertainty